Publications

1. Gee M, Atai K, Coller HA, Yeates TO, Castells-Graells R. Designed fluorescent protein cages as fiducial markers for targeted cell imaging.. bioRxiv : the preprint server for biology, 2024.
2. Cheng MW, Mitra M, Coller HA. Pan-cancer landscape of epigenetic factor expression predicts tumor outcome.. Communications biology, 2023.
3. Hess RA, Erickson OA, Cole RB, Isaacs JM, Alvarez-Clare S, Arnold J, Augustus-Wallace A, Ayoob JC, Berkowitz A, Branchaw J, Burgio KR, Cannon CH, Ceballos RM, Cohen CS, Coller H, Disney J, Doze VA, Eggers MJ, Ferguson EL, Gray JJ, Greenberg JT, Hoffmann A, Jensen-Ryan D, Kao RM, Keene AC, Kowalko JE, Lopez SA, Mathis C, Minkara M, Murren CJ, Ondrechen MJ, Ordoñez P, Osano A, Padilla-Crespo E, Palchoudhury S, Qin H, Ramírez-Lugo J, Reithel J, Shaw CA, Smith A, Smith RJ, Tsien F, Dolan EL. Virtually the Same? Evaluating the Effectiveness of Remote Undergraduate Research Experiences.. CBE life sciences education, 2023.
4. Mitra M, Coller HA. Screen time: an unbiased search for histone mutations that affect quiescence and chronological aging.. The FEBS journal, 2023.
5. Zhao Y, Wang B, Tan J, Yin H, Huang R, Zhu J, Lin S, Zhou Y, Jelinek D, Sun Z, Youssef K, Voisin L, Horrillo A, Zhang K, Wu BM, Coller HA, Lu DC, Pei Q, Emaminejad S. Soft strain-insensitive bioelectronics featuring brittle materials.. Science (New York, N.Y.), 2022.
6. Coller HA. Highlighting recent impactful publications in Physiological Genomics.. Physiological genomics, 2022.
7. Bodine SC, Brooks HL, Coller HA, Domingos AI, Frey MR, Goodman BE, Kleyman TR, Lindsey ML, Morty RE, Petersen OH, Ramírez JM, Schaefer L, Thomsen MB, Yosten GLC. An American Physiological Society cross-journal Call for Papers on "The Physiology of Obesity".. American journal of physiology. Lung cellular and molecular physiology, 2022.
8. Lin S, Cheng X, Zhu J, Wang B, Jelinek D, Zhao Y, Wu TY, Horrillo A, Tan J, Yeung J, Yan W, Forman S, Coller HA, Milla C, Emaminejad S. Wearable microneedle-based electrochemical aptamer biosensing for precision dosing of drugs with narrow therapeutic windows.. Science advances, 2022.
9. Coller HA, Beggs S, Andrews S, Maloy J, Chiu A, Sankararaman S, Pellegrini M, Freimer N, Johnson T, Papp J, Eskin E, Hoffmann A. Bruins-in-Genomics: Evaluation of the impact of a UCLA undergraduate summer program in computational biology on participating students.. PloS one, 2022.
10. Erickson OA, Cole RB, Isaacs JM, Alvarez-Clare S, Arnold J, Augustus-Wallace A, Ayoob JC, Berkowitz A, Branchaw J, Burgio KR, Cannon CH, Ceballos RM, Cohen CS, Coller H, Disney J, Doze VA, Eggers MJ, Farina S, Ferguson EL, Gray JJ, Greenberg JT, Hoffmann A, Jensen-Ryan D, Kao RM, Keene AC, Kowalko JE, Lopez SA, Mathis C, Minkara M, Murren CJ, Ondrechen MJ, Ordoñez P, Osano A, Padilla-Crespo E, Palchoudhury S, Qin H, Ramírez-Lugo J, Reithel J, Shaw CA, Smith A, Smith R, Summers AP, Tsien F, Dolan EL. "How Do We Do This at a Distance?!" A Descriptive Study of Remote Undergraduate Research Programs during COVID-19.. CBE life sciences education, 2022.
11. Coller HA. Prereplication complex proteins get caught moonlighting.. PLoS biology, 2022.
12. Coller HA. Correction: Stressed-out yeast do not pass GO.. The Journal of cell biology, 2022.
13. Coller HA. Stressed-out yeast do not pass GO.. The Journal of cell biology, 2021.
14. Hiiragi T, Gladfelter AS, Miguel-Aliaga I, Coller HA, Lau OS, McBride HM, Aoki K, Linkermann A, Santaguida S, Wasteneys G, Rivron NC, Shahbazi MN, Ebisuya M, Lancaster MA. 20 years of Developmental Cell: Looking forward.. Developmental cell, 2021.
15. Bonitto K, Sarathy K, Atai K, Mitra M, Coller HA. Is There a Histone Code for Cellular Quiescence?. Frontiers in cell and developmental biology, 2021.
16. Coller HA. Incoming Editor-in-Chief editorial.. Physiological genomics, 2021.
17. Bodine SC, Brooks HL, Bunnett NW, Coller HA, Frey MR, Joe B, Kleyman TR, Lindsey ML, Marette A, Morty RE, Ramírez JM, Thomsen MB, Yosten GLC. An American Physiological Society cross-journal Call for Papers on "Inter-Organ Communication in Homeostasis and Disease".. American journal of physiology. Lung cellular and molecular physiology, 2021.
18. Coller HA. The return of quiescence metabolites.. Nature cell biology, 2021.
19. Jelinek D, Zhang ER, Ambrus A, Haley E, Guinn E, Vo A, Le P, Kesaf AE, Nguyen J, Guo L, Frederick D, Sun Z, Guo N, Sevier P, Bilotta E, Atai K, Voisin L, Coller HA. A Mouse Model to Investigate the Role of Cancer-associated Fibroblasts in Tumor Growth.. Journal of visualized experiments : JoVE, 2020.
20. Tan DJ, Mitra M, Chiu AM, Coller HA. Intron retention is a robust marker of intertumoral heterogeneity in pancreatic ductal adenocarcinoma.. NPJ genomic medicine, 2020.
21. Corvalan AZ, Coller HA. Methylation of histone 4's lysine 20: a critical analysis of the state of the field.. Physiological genomics, 2020.
22. Mitra M, Lee HN, Coller HA. Splicing Busts a Move: Isoform Switching Regulates Migration: (Trends in Cell Biology 30, 74-85, 2020).. Trends in cell biology, 2020.
23. Coller HA. Regulation of Cell Cycle Entry and Exit: A Single Cell Perspective.. Comprehensive Physiology, 2019.
24. Mitra M, Lee HN, Coller HA. Splicing Busts a Move: Isoform Switching Regulates Migration.. Trends in cell biology, 2019.
25. Coller HA. The paradox of metabolism in quiescent stem cells.. FEBS letters, 2019.
26. Coller HA. Fibroblasts Prompt Tumors to Mobilize Their Glycogen Reserves.. Trends in cell biology, 2019.
27. Lee HN, Bosompra OA, Coller HA. RECK isoforms differentially regulate fibroblast migration by modulating tubulin post-translational modifications.. Biochemical and biophysical research communications, 2019.
28. Mitra M, Johnson EL, Swamy VS, Nersesian LE, Corney DC, Robinson DG, Taylor DG, Ambrus AM, Jelinek D, Wang W, Batista SL, Coller HA. Alternative polyadenylation factors link cell cycle to migration.. Genome biology, 2018.
29. Sullivan WJ, Mullen PJ, Schmid EW, Flores A, Momcilovic M, Sharpley MS, Jelinek D, Whiteley AE, Maxwell MB, Wilde BR, Banerjee U, Coller HA, Shackelford DB, Braas D, Ayer DE, de Aguiar Vallim TQ, Lowry WE, Christofk HR. Extracellular Matrix Remodeling Regulates Glucose Metabolism through TXNIP Destabilization.. Cell, 2018.
30. Chiu AM, Mitra M, Boymoushakian L, Coller HA. Integrative analysis of the inter-tumoral heterogeneity of triple-negative breast cancer.. Scientific reports, 2018.
31. Jelinek D, Flores A, Uebelhoer M, Pasque V, Plath K, Iruela-Arispe ML, Christofk HR, Lowry WE, Coller HA. Mapping Metabolism: Monitoring Lactate Dehydrogenase Activity Directly in Tissue.. Journal of visualized experiments : JoVE, 2018.
32. Lee HN, Mitra M, Bosompra O, Corney DC, Johnson EL, Rashed N, Ho LD, Coller HA. RECK isoforms have opposing effects on cell migration.. Molecular biology of the cell, 2018.
33. Coller HA. MYC sets a tumour-stroma metabolic loop.. Nature cell biology, 2018.
34. Coller HA. DNA replication licensing in stem cells: Gatekeeping the commitment to proliferation.. The Journal of cell biology, 2018.
35. Mitra M, Lee HN, Coller HA. Determining Genome-wide Transcript Decay Rates in Proliferating and Quiescent Human Fibroblasts.. Journal of visualized experiments : JoVE, 2018.
36. Mitra M, Ho LD, Coller HA. An In Vitro Model of Cellular Quiescence in Primary Human Dermal Fibroblasts.. Methods in molecular biology (Clifton, N.J.), 2018.
37. Flores A, Schell J, Krall AS, Jelinek D, Miranda M, Grigorian M, Braas D, White AC, Zhou JL, Graham NA, Graeber T, Seth P, Evseenko D, Coller HA, Rutter J, Christofk HR, Lowry WE. Lactate dehydrogenase activity drives hair follicle stem cell activation.. Nature cell biology, 2017.
38. Coller HA. Symposium on single cell analysis and genomic approaches, Experimental Biology 2017 Chicago, Illinois, April 23, 2017.. Physiological genomics, 2017.
39. Coller HA, Desai A. Cell cycle, cell division, and cell death.. Molecular biology of the cell, 2017.
40. Johnson EL, Robinson DG, Coller HA. Widespread changes in mRNA stability contribute to quiescence-specific gene expression patterns in a fibroblast model of quiescence.. BMC genomics, 2017.
41. Mitra M, Coller HA. RNAs that make a heart beat.. Annals of translational medicine, 2016.
42. Nouvong A, Ambrus AM, Zhang ER, Hultman L, Coller HA. Reactive oxygen species and bacterial biofilms in diabetic wound healing.. Physiological genomics, 2016.
43. Rabinowitz JD, Coller HA. Partners in the Warburg effect.. eLife, 2016.
44. Mitra M, Johnson EL, Coller HA. Alternative polyadenylation can regulate post-translational membrane localization.. Trends in cell & molecular biology, 2015.
45. Coller HA. The Runt-related transcription factor 1 in prostate cancer-associated fibroblasts.. Proceedings of the National Academy of Sciences of the United States of America, 2014.
46. Corney DC, Coller HA. On form and function: does chromatin packing regulate the cell cycle?. Physiological genomics, 2014.
47. Coller HA. Is cancer a metabolic disease?. The American journal of pathology, 2013.
48. Evertts AG, Manning AL, Wang X, Dyson NJ, Garcia BA, Coller HA. H4K20 methylation regulates quiescence and chromatin compaction.. Molecular biology of the cell, 2013.
49. Jiang P, Singh M, Coller HA. Computational assessment of the cooperativity between RNA binding proteins and MicroRNAs in Transcript Decay.. PLoS computational biology, 2013.
50. Coller HA, Systems Biology of Cell State Regulation Editorial Board. Introducing the systems biology of cell state regulation section of Physiological Genomics.. Physiological genomics, 2013.
51. Evertts AG, Zee BM, Dimaggio PA, Gonzales-Cope M, Coller HA, Garcia BA. Quantitative dynamics of the link between cellular metabolism and histone acetylation.. The Journal of biological chemistry, 2013.
52. Suh EJ, Remillard MY, Legesse-Miller A, Johnson EL, Lemons JM, Chapman TR, Forman JJ, Kojima M, Silberman ES, Coller HA. A microRNA network regulates proliferative timing and extracellular matrix synthesis during cellular quiescence in fibroblasts.. Genome biology, 2012.
53. Evertts AG, Coller HA. Back to the origin: reconsidering replication, transcription, epigenetics, and cell cycle control.. Genes & cancer, 2012.
54. Legesse-Miller A, Raitman I, Haley EM, Liao A, Sun LL, Wang DJ, Krishnan N, Lemons JM, Suh EJ, Johnson EL, Lund BA, Coller HA. Quiescent fibroblasts are protected from proteasome inhibition-mediated toxicity.. Molecular biology of the cell, 2012.
55. Valcourt JR, Lemons JM, Haley EM, Kojima M, Demuren OO, Coller HA. Staying alive: metabolic adaptations to quiescence.. Cell cycle (Georgetown, Tex.), 2012.
56. Klionsky DJ, Abdalla FC, Abeliovich H, Abraham RT, Acevedo-Arozena A, Adeli K, Agholme L, Agnello M, Agostinis P, Aguirre-Ghiso JA, Ahn HJ, Ait-Mohamed O, Ait-Si-Ali S, Akematsu T, Akira S, Al-Younes HM, Al-Zeer MA, Albert ML, Albin RL, Alegre-Abarrategui J, Aleo MF, Alirezaei M, Almasan A, Almonte-Becerril M, Amano A, Amaravadi R, Amarnath S, Amer AO, Andrieu-Abadie N, Anantharam V, Ann DK, Anoopkumar-Dukie S, Aoki H, Apostolova N, Arancia G, Aris JP, Asanuma K, Asare NY, Ashida H, Askanas V, Askew DS, Auberger P, Baba M, Backues SK, Baehrecke EH, Bahr BA, Bai XY, Bailly Y, Baiocchi R, Baldini G, Balduini W, Ballabio A, Bamber BA, Bampton ET, Bánhegyi G, Bartholomew CR, Bassham DC, Bast RC, Batoko H, Bay BH, Beau I, Béchet DM, Begley TJ, Behl C, Behrends C, Bekri S, Bellaire B, Bendall LJ, Benetti L, Berliocchi L, Bernardi H, Bernassola F, Besteiro S, Bhatia-Kissova I, Bi X, Biard-Piechaczyk M, Blum JS, Boise LH, Bonaldo P, Boone DL, Bornhauser BC, Bortoluci KR, Bossis I, Bost F, Bourquin JP, Boya P, Boyer-Guittaut M, Bozhkov PV, Brady NR, Brancolini C, Brech A, Brenman JE, Brennand A, Bresnick EH, Brest P, Bridges D, Bristol ML, Brookes PS, Brown EJ, Brumell JH, Brunetti-Pierri N, Brunk UT, Bulman DE, Bultman SJ, Bultynck G, Burbulla LF, Bursch W, Butchar JP, Buzgariu W, Bydlowski SP, Cadwell K, Cahová M, Cai D, Cai J, Cai Q, Calabretta B, Calvo-Garrido J, Camougrand N, Campanella M, Campos-Salinas J, Candi E, Cao L, Caplan AB, Carding SR, Cardoso SM, Carew JS, Carlin CR, Carmignac V, Carneiro LA, Carra S, Caruso RA, Casari G, Casas C, Castino R, Cebollero E, Cecconi F, Celli J, Chaachouay H, Chae HJ, Chai CY, Chan DC, Chan EY, Chang RC, Che CM, Chen CC, Chen GC, Chen GQ, Chen M, Chen Q, Chen SS, Chen W, Chen X, Chen X, Chen X, Chen YG, Chen Y, Chen Y, Chen YJ, Chen Z, Cheng A, Cheng CH, Cheng Y, Cheong H, Cheong JH, Cherry S, Chess-Williams R, Cheung ZH, Chevet E, Chiang HL, Chiarelli R, Chiba T, Chin LS, Chiou SH, Chisari FV, Cho CH, Cho DH, Choi AM, Choi D, Choi KS, Choi ME, Chouaib S, Choubey D, Choubey V, Chu CT, Chuang TH, Chueh SH, Chun T, Chwae YJ, Chye ML, Ciarcia R, Ciriolo MR, Clague MJ, Clark RS, Clarke PG, Clarke R, Codogno P, Coller HA, Colombo MI, Comincini S, Condello M, Condorelli F, Cookson MR, Coombs GH, Coppens I, Corbalan R, Cossart P, Costelli P, Costes S, Coto-Montes A, Couve E, Coxon FP, Cregg JM, Crespo JL, Cronjé MJ, Cuervo AM, Cullen JJ, Czaja MJ, D'Amelio M, Darfeuille-Michaud A, Davids LM, Davies FE, De Felici M, de Groot JF, de Haan CA, De Martino L, De Milito A, De Tata V, Debnath J, Degterev A, Dehay B, Delbridge LM, Demarchi F, Deng YZ, Dengjel J, Dent P, Denton D, Deretic V, Desai SD, Devenish RJ, Di Gioacchino M, Di Paolo G, Di Pietro C, Díaz-Araya G, Díaz-Laviada I, Diaz-Meco MT, Diaz-Nido J, Dikic I, Dinesh-Kumar SP, Ding WX, Distelhorst CW, Diwan A, Djavaheri-Mergny M, Dokudovskaya S, Dong Z, Dorsey FC, Dosenko V, Dowling JJ, Doxsey S, Dreux M, Drew ME, Duan Q, Duchosal MA, Duff K, Dugail I, Durbeej M, Duszenko M, Edelstein CL, Edinger AL, Egea G, Eichinger L, Eissa NT, Ekmekcioglu S, El-Deiry WS, Elazar Z, Elgendy M, Ellerby LM, Eng KE, Engelbrecht AM, Engelender S, Erenpreisa J, Escalante R, Esclatine A, Eskelinen EL, Espert L, Espina V, Fan H, Fan J, Fan QW, Fan Z, Fang S, Fang Y, Fanto M, Fanzani A, Farkas T, Farré JC, Faure M, Fechheimer M, Feng CG, Feng J, Feng Q, Feng Y, Fésüs L, Feuer R, Figueiredo-Pereira ME, Fimia GM, Fingar DC, Finkbeiner S, Finkel T, Finley KD, Fiorito F, Fisher EA, Fisher PB, Flajolet M, Florez-McClure ML, Florio S, Fon EA, Fornai F, Fortunato F, Fotedar R, Fowler DH, Fox HS, Franco R, Frankel LB, Fransen M, Fuentes JM, Fueyo J, Fujii J, Fujisaki K, Fujita E, Fukuda M, Furukawa RH, Gaestel M, Gailly P, Gajewska M, Galliot B, Galy V, Ganesh S, Ganetzky B, Ganley IG, Gao FB, Gao GF, Gao J, Garcia L, Garcia-Manero G, Garcia-Marcos M, Garmyn M, Gartel AL, Gatti E, Gautel M, Gawriluk TR, Gegg ME, Geng J, Germain M, Gestwicki JE, Gewirtz DA, Ghavami S, et al. Guidelines for the use and interpretation of assays for monitoring autophagy.. Autophagy, 2012.
57. Ventura-Clapier R, Coller HA. A step toward systems metabolomics.. Physiological genomics, 2012.
58. Wang DJ, Legesse-Miller A, Johnson EL, Coller HA. Regulation of the let-7a-3 promoter by NF-κB.. PloS one, 2012.
59. Jiang P, Coller H. Functional interactions between microRNAs and RNA binding proteins.. MicroRNA (Shariqah, United Arab Emirates), 2012.
60. Waldron L, Coller HA, Huttenhower C. Integrative approaches for microarray data analysis.. Methods in molecular biology (Clifton, N.J.), 2012.
61. Coller HA. Cell biology. The essence of quiescence.. Science (New York, N.Y.), 2011.
62. Guo JY, Chen HY, Mathew R, Fan J, Strohecker AM, Karsli-Uzunbas G, Kamphorst JJ, Chen G, Lemons JM, Karantza V, Coller HA, Dipaola RS, Gelinas C, Rabinowitz JD, White E. Activated Ras requires autophagy to maintain oxidative metabolism and tumorigenesis.. Genes & development, 2011.
63. Wellen KE, Lu C, Mancuso A, Lemons JM, Ryczko M, Dennis JW, Rabinowitz JD, Coller HA, Thompson CB. The hexosamine biosynthetic pathway couples growth factor-induced glutamine uptake to glucose metabolism.. Genes & development, 2010.
64. Lemons JM, Feng XJ, Bennett BD, Legesse-Miller A, Johnson EL, Raitman I, Pollina EA, Rabitz HA, Rabinowitz JD, Coller HA. Quiescent fibroblasts exhibit high metabolic activity.. PLoS biology, 2010.
65. Forman JJ, Coller HA. The code within the code: microRNAs target coding regions.. Cell cycle (Georgetown, Tex.), 2010.
66. Ward PS, Patel J, Wise DR, Abdel-Wahab O, Bennett BD, Coller HA, Cross JR, Fantin VR, Hedvat CV, Perl AE, Rabinowitz JD, Carroll M, Su SM, Sharp KA, Levine RL, Thompson CB. The common feature of leukemia-associated IDH1 and IDH2 mutations is a neomorphic enzyme activity converting alpha-ketoglutarate to 2-hydroxyglutarate.. Cancer cell, 2010.
67. Sang L, Roberts JM, Coller HA. Hijacking HES1: how tumors co-opt the anti-differentiation strategies of quiescent cells.. Trends in molecular medicine, 2009.
68. Huttenhower C, Mutungu KT, Indik N, Yang W, Schroeder M, Forman JJ, Troyanskaya OG, Coller HA. Detailing regulatory networks through large scale data integration.. Bioinformatics (Oxford, England), 2009.
69. Sang L, Coller HA. Fear of commitment: Hes1 protects quiescent fibroblasts from irreversible cellular fates.. Cell cycle (Georgetown, Tex.), 2009.
70. Huttenhower C, Haley EM, Hibbs MA, Dumeaux V, Barrett DR, Coller HA, Troyanskaya OG. Exploring the human genome with functional maps.. Genome research, 2009.
71. Legesse-Miller A, Elemento O, Pfau SJ, Forman JJ, Tavazoie S, Coller HA. let-7 Overexpression leads to an increased fraction of cells in G2/M, direct down-regulation of Cdc34, and stabilization of Wee1 kinase in primary fibroblasts.. The Journal of biological chemistry, 2009.
72. Coller HA, Kruglyak L. Genetics. It's the sequence, stupid!. Science (New York, N.Y.), 2008.
73. Forman JJ, Legesse-Miller A, Coller HA. A search for conserved sequences in coding regions reveals that the let-7 microRNA targets Dicer within its coding sequence.. Proceedings of the National Academy of Sciences of the United States of America, 2008.
74. Sudo H, Li-Sucholeiki XC, Marcelino LA, Gruhl AN, Herrero-Jimenez P, Zarbl H, Willey JC, Furth EE, Morgenthaler S, Coller HA, Ekstrom PO, Kurzweil R, Gostjeva EV, Thilly WG. Fetal-juvenile origins of point mutations in the adult human tracheal-bronchial epithelium: absence of detectable effects of age, gender or smoking status.. Mutation research, 2008.
75. Sang L, Coller HA, Roberts JM. Control of the reversibility of cellular quiescence by the transcriptional repressor HES1.. Science (New York, N.Y.), 2008.
76. Pollina EA, Legesse-Miller A, Haley EM, Goodpaster T, Randolph-Habecker J, Coller HA. Regulating the angiogenic balance in tissues.. Cell cycle (Georgetown, Tex.), 2008.
77. Goodpaster T, Legesse-Miller A, Hameed MR, Aisner SC, Randolph-Habecker J, Coller HA. An immunohistochemical method for identifying fibroblasts in formalin-fixed, paraffin-embedded tissue.. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2007.
78. Coller HA, Forman JJ, Legesse-Miller A. "Myc'ed messages": myc induces transcription of E2F1 while inhibiting its translation via a microRNA polycistron.. PLoS genetics, 2007.
79. Coller HA. What's taking so long? S-phase entry from quiescence versus proliferation.. Nature reviews. Molecular cell biology, 2007.
80. Huttenhower C, Flamholz AI, Landis JN, Sahi S, Myers CL, Olszewski KL, Hibbs MA, Siemers NO, Troyanskaya OG, Coller HA. Nearest Neighbor Networks: clustering expression data based on gene neighborhoods.. BMC bioinformatics, 2007.
81. Miller DL, Myers CL, Rickards B, Coller HA, Flint SJ. Adenovirus type 5 exerts genome-wide control over cellular programs governing proliferation, quiescence, and survival.. Genome biology, 2007.
82. Munger J, Bajad SU, Coller HA, Shenk T, Rabinowitz JD. Dynamics of the cellular metabolome during human cytomegalovirus infection.. PLoS pathogens, 2006.
83. Coller HA, Sang L, Roberts JM. A new description of cellular quiescence.. PLoS biology, 2006.
84. Zheng W, Khrapko K, Coller HA, Thilly WG, Copeland WC. Origins of human mitochondrial point mutations as DNA polymerase gamma-mediated errors.. Mutation research, 2006.
85. Coller HA, Khrapko K, Herrero-Jimenez P, Vatland JA, Li-Sucholeiki XC, Thilly WG. Clustering of mutant mitochondrial DNA copies suggests stem cells are common in human bronchial epithelium.. Mutation research, 2005.
86. Smith LL, Coller HA, Roberts JM. Telomerase modulates expression of growth-controlling genes and enhances cell proliferation.. Nature cell biology, 2003.
87. Staunton JE, Slonim DK, Coller HA, Tamayo P, Angelo MJ, Park J, Scherf U, Lee JK, Reinhold WO, Weinstein JN, Mesirov JP, Lander ES, Golub TR. Chemosensitivity prediction by transcriptional profiling.. Proceedings of the National Academy of Sciences of the United States of America, 2001.
88. Khrapko K, Coller HA, Li-Sucholeiki XC, André PC, Thilly WG. High resolution analysis of point mutations by constant denaturant capillary electrophoresis (CDCE).. Methods in molecular biology (Clifton, N.J.), 2001.
89. Coller HA, Grandori C, Tamayo P, Colbert T, Lander ES, Eisenman RN, Golub TR. Expression analysis with oligonucleotide microarrays reveals that MYC regulates genes involved in growth, cell cycle, signaling, and adhesion.. Proceedings of the National Academy of Sciences of the United States of America, 2000.
90. Golub TR, Slonim DK, Tamayo P, Huard C, Gaasenbeek M, Mesirov JP, Coller H, Loh ML, Downing JR, Caligiuri MA, Bloomfield CD, Lander ES. Molecular classification of cancer: class discovery and class prediction by gene expression monitoring.. Science (New York, N.Y.), 1999.
91. Khrapko K, Bodyak N, Thilly WG, van Orsouw NJ, Zhang X, Coller HA, Perls TT, Upton M, Vijg J, Wei JY. Cell-by-cell scanning of whole mitochondrial genomes in aged human heart reveals a significant fraction of myocytes with clonally expanded deletions.. Nucleic acids research, 1999.
92. Khrapko K, Coller HA, Hanekamp JS, Thilly WG. Identification of point mutations in mixtures by capillary electrophoresis hybridization.. Nucleic acids research, 1998.
93. Marcelino LA, André PC, Khrapko K, Coller HA, Griffith J, Thilly WG. Chemically induced mutations in mitochondrial DNA of human cells: mutational spectrum of N-methyl-N'-nitro-N-nitrosoguanidine.. Cancer research, 1998.
94. Coller HA, Khrapko K, Torres A, Frampton MW, Utell MJ, Thilly WG. Mutational spectra of a 100-base pair mitochondrial DNA target sequence in bronchial epithelial cells: a comparison of smoking and nonsmoking twins.. Cancer research, 1998.
95. Khrapko K, Coller HA, André PC, Li XC, Hanekamp JS, Thilly WG. Mitochondrial mutational spectra in human cells and tissues.. Proceedings of the National Academy of Sciences of the United States of America, 1997.
96. Khrapko K, Coller H, André P, Li XC, Foret F, Belenky A, Karger BL, Thilly WG. Mutational spectrometry without phenotypic selection: human mitochondrial DNA.. Nucleic acids research, 1997.
97. Khrapko K, Coller H, Thilly W. Efficiency of separation of DNA mutations by constant denaturant capillary electrophoresis is controlled by the kinetics of DNA melting equilibrium.. Electrophoresis, 1996.
98. Coller HA, Coller BS. Poisson statistical analysis of repetitive subcloning by the limiting dilution technique as a way of assessing hybridoma monoclonality.. Methods in enzymology, 1986.
99. Coller HA, Coller BS. Statistical analysis of repetitive subcloning by the limiting dilution technique with a view toward ensuring hybridoma monoclonality.. Hybridoma, 1983.